Wang, Y.-H., & Gupta, H. V. (2024). Towards interpretable physical-conceptual catchment-scale hydrological modeling using the mass-conserving-perceptron. Water Resources Research, 60, e2024WR037224. |
Burrell, D. J., Spencer, M. F., & Driggers, R. G. (2024). Closed-loop adaptive optics in the presence of speckle and weak scintillation. Journal of Optics.
|
Burrell, D. J., Spencer, M. F., & Driggers, R. G. (2024). Open-loop wavefront sensing in the presence of speckle and weak scintillation. Optics Communications, 130960. |
Sundman, M. H., Green, J. M., Fuglevand, A. J., & Chou, Y.-H. (2024). TMS-derived short afferent inhibition discriminates cognitive status in older adults without dementia. Aging Brain, 6:100123. |
Sundman, M. H., De Vault, B. E. A., Chen, Y. A., Madhavan, L., Fuglevand, A. J., & Chou, Y.-H. (2023). The (hyper)excitable brain: What can a ubiquitous TMS measure reveal about cognitive aging? Neurobiology of Aging, 132, 250-252. |
Das Goswami, B. R., Jabbari, V., Shahbazian-Yassar, R., Mashayek, F., & Yurkiv, V. (2023). Unraveling Ion Diffusion Pathways and Energetics in Polycrystalline SEI of Lithium-Based Batteries: Combined Cryo-HRTEM and DFT Study. The Journal of Physical Chemistry C. |
Kuo, P. H., Chen, Y. A., Rodriguez, R. Stuehm, C., Chalasani, P., Chen, N.-K., & Chou, Y.-H. (2023). Transcranial magnetic stimulation for the treatment of chemo brain. Sensors, 23(19):8017.
|
Gonzalez, E., Zarei, A., Hendler, N., Simmons, T., Zarei, A., Demieville, J., ... & Pauli, D. (2023). PhytoOracle: Scalable, modular phenomics data processing pipelines. Frontiers in Plant Science, 14. |
Liu, Y., Lim, K., Sundman, M., Ugonna, C., Ton That, V., Cowen, S., & Chou, Y.-H. (2023). Association between responsiveness to transcranial magnetic stimulation and interhemispheric functional connectivity of sensorimotor cortex. Brain Connectivity, 13(1). 39-50. |
Gong, Z., Rodriguez, N., Gagatsos, C. N., Guha, S., & Bash, B. A. (2022) Quantum-Enhanced Transmittance Sensing. IEEE Journal of Selected Topics in Signal Processing, 17(2), 473-490. |
Benowitz, K. M., Allan, C. W., Jaworski, C. C., Sanderson, M. J., Diaz, F., Chen, X., & Matzkin, L. M. (2022). Chromosome-length genome assemblies of cactophilic Drosophila illuminate links between structural and sequence evolution. bioRxiv. |
Manga, V. R., Muralidharan, K., & Zega, T. J. (2022). The interplay between twinning and cation inversion in MgAl2O4-spinel: Implications for a nebular thermochronometer. American Mineralogist, 107(8), 1470-1476. |
Zanetta, P. M. (2022). The Unrestrained Use of Python Libraries for Bridging the Gap Between Planetary and Material Sciences. Microscopy and Microanalysis, 28(S1), 2686-2688. |
Song, J. P., Clay, R. T., & Mazumdar, S. (2022). Valence Transition Theory of the Pressure-Induced Dimensionality Crossover in Superconducting Sr $ _ {14-x} $ Ca $ _x $ Cu $ _ {24} $ O $ _ {41} $. arXiv preprint arXiv:2207.00628. |
Chen, A. Y., Ton That, V., Ugonna, C., Liu, Y., Nadal, L., & Chou, Y.-H. (2022). Diffusion MRI-guided theta burst stimulation enhances memory and functional connectivity along inferior longitudinal fasciculus in mild cognitive impairment. Proc Natl Acad Sci U S A, 119(21), e2113778119. |
Dunham, A. M., Kiser, E., Kargel, J. S., Haritashya, U. K., Watson, C. S., Shugar, D. H., ... & DeCelles, P. G. (2022). Topographic control on ground motions and landslides from the 2015 Gorkha earthquake. Geophysical Research Letters, e2022GL098582. |
Hviding, R. E., Hainline, K. N., Rieke, M., Juneau, S., Lyu, J., & Pucha, R. (2022). A New Infrared Criterion for Selecting Active Galactic Nuclei to Lower Luminosities. The Astronomical Journal, 163(5), 224. |
Thakur, A. K., Muralidharan, K., Zega, T. J., & Ziurys, L. M. (2022). A nanometric window on fullerene formation in the interstellar medium: Insights from molecular dynamics studies. The Journal of Chemical Physics, 156(15), 154704. |
Bamberger, N. D., Dyer, D., Parida, K. N., El-Assaad, T. H., Pursell, D., McGrath, D. V., ... & Monti, O. L. (2022). Beyond Simple Structure–Function Relationships: The Interplay of Geometry, Electronic Structure, and Molecule/Electrode Coupling in Single-Molecule Junctions. The Journal of Physical Chemistry C, 126(15), 6653-6661. |
Román‐Palacios, C., Moraga‐López, D., & Wiens, J. J. (2022). The origins of global biodiversity on land, sea and freshwater. Ecology letters. |
Lin, A. S., Monson, A., Mahadevan, S., Ninan, J. P., Halverson, S., Nitroy, C., ... & Stefansson, G. (2022). Observing the Sun as a star: Design and early results from the NEID solar feed. The Astronomical Journal, 163(4), 184. |
Gorelik, R., Asaduzzaman, A., Manga, V. R., Thakur, A., & Muralidharan, K. (2022). A First-Principles Investigation of Lithium and Sodium Ion Diffusion in C60 Molecular Solids. The Journal of Physical Chemistry C, 126(9), 4259-4266. |
Yang, B., Balazs, K. R., Butterfield, B. J., Laushman, K. M., Munson, S. M., Gornish, E. S., & Barberán, A. (2022). Does restoration of plant diversity trigger concomitant soil microbiome changes in dryland ecosystems?. Journal of Applied Ecology, 59(2), 560-573. |
Kinney, A. C., Current, S., & Lega, J. (2021). Aedes-AI: Neural network models of mosquito abundance. PLoS computational biology, 17(11), e1009467. |
Spotnitz, M., Kwong, N. H., & Binder, R. (2021)Terahertz spectroscopy of semiconductor microcavity lasers: Photon lasers. Physical Review B, 104(11), 115305. |
Song, J. P., Mazumdar, S., & Clay, R. T. (2021). Absence of Luther-Emery superconducting phase in the three-band model for cuprate ladders. Physical Review B, 104(10), 104504. |
Hosseinverdi, S., & Fasel, H. F. (2022). Towards understanding of natural boundary-layer transition for low-speed flows via random excitation. In IUTAM Laminar-Turbulent Transition (pp. 391-405). Springer, Cham. |
Chen, Y., Martinez, A., Cleavenger, S., Rudolph, J., & Barberán, A. (2021). Changes in soil microbial communities across an urbanization gradient: A local-scale temporal study in the arid southwestern usa. Microorganisms, 9(7), 1470. |
Gillan, J. K., Ponce‐Campos, G. E., Swetnam, T. L., Gorlier, A., Heilman, P., & McClaran, M. P. (2021). Innovations to expand drone data collection and analysis for rangeland monitoring. Ecosphere, 12(7), e03649. |
He, W., Guha, S., Shapiro, J. H., & Bash, B. A. (2021). Performance analysis of free-space quantum key distribution using multiple spatial modes. Optics Express, 29(13), 19305-19318. |
Li, H., & Bredas, J. L. (2021). Impact of structural defects on the elastic properties of two-dimensional covalent organic frameworks (2D COFs) under tensile stress. Chemistry of Materials, 33(12), 4529-4540. |
Zhou, Z., Daly, A. M., & Kukolich, S. G. (2021). Microwave measurements of rotational transitions and nitrogen quadrupole coupling for 2-aminopyridine. Journal of Molecular Spectroscopy, 378, 111457. |
Li, H., Evans, A. M., Dichtel, W. R., & Bredas, J. L. (2021). Quantitative Description of the Lateral Growth of Two-Dimensional Covalent Organic Frameworks Reveals Self-Templation Effects. ACS Materials Letters, 3(4), 398-405. |
Klein, K. G., Verniero, J. L., Alterman, B., Bale, S., Case, A., Kasper, J. C., ... & Whittlesey, P. (2021). Inferred Linear Stability of Parker Solar Probe Observations Using One-and Two-component Proton Distributions. The Astrophysical Journal, 909(1), 7. |
Chen, Y., Neilson, J. W., Kushwaha, P., Maier, R. M., & Barberán, A. (2021). Life-history strategies of soil microbial communities in an arid ecosystem. The ISME journal, 15(3), 649-657. |
Xiong, Z., Potter, C. J., & McLeod, E. (2021). High-speed lens-free holographic sensing of protein molecules using quantitative agglutination assays. ACS sensors, 6(3), 1208-1217. |
Zhang, Y., Weeks, R. R., Lecaplain, C., Harilal, S. S., Yeak, J., Phillips, M. C., & Jones, R. J. (2021). Burst-mode dual-comb spectroscopy. Optics letters, 46(4), 860-863. |
Luk, S. M., Vergnet, H., Lafont, O., Lewandowski, P., Kwong, N. H., Galopin, E., ... & Baudin, E. (2021). All-optical beam steering using the polariton lighthouse effect. ACS Photonics, 8(2), 449-454. |
Ivie, J. A., Bamberger, N. D., Parida, K. N., Shepard, S., Dyer, D., Saraiva-Souza, A., ... & Monti, O. L. (2021). Correlated energy-level alignment effects determine substituent-tuned single-molecule conductance. ACS Applied Materials & Interfaces, 13(3), 4267-4277. |
Lemoine, D. (2021). The climate risk premium: how uncertainty affects the social cost of carbon. Journal of the Association of Environmental and Resource Economists, 8(1), 27-57. |
Tanjaroon, C., Mills, D. D., Hoyos, C. A. J., & Kukolich, S. G. (2021). Calculations and analysis of 55Mn nuclear quadrupole coupling for asymmetric top acyl methyl manganese pentacarbonyl. Chemical Physics Letters, 762, 138151. |
Sundman. M., Lim, K., Ton That, V., Mizell, J.-M., Ugonna, C., Rodriguez, R., Chen, N.-K., Fuglevand, A. J., Liu, Y., Wilson, R. C., Fellous, J.-M., Rapcsak, S., & Chou, Y.-H. (2020). Transcranial magnetic stimulation reveals diminished homeostatic metaplasticity in cognitively impaired adults. Brain Communications, 2, fcaa203. |
Kuo, H. P., Zhang, X., Stuehm, C. Chou, Y.-H., Chen, N.-K. (2020). Functional magnetic resonance imaging reveals Taiji effects on neuronal networks of the brain. Journal of Chinese Health Practices. |
Jaworski, C. C., Allan, C. W., & Matzkin, L. M. (2020). Chromosome‐level hybrid de novo genome assemblies as an attainable option for nonmodel insects. Molecular ecology resources, 20(5), 1277-1293. |
Tanjaroon, C., Zhou, Z., Mills, D., Keck, K., & Kukolich, S. G. (2020). Microwave Spectra and Theoretical Calculations for Two Structural Isomers of Methylmanganese Pentacarbonyl. Inorganic chemistry, 59(9), 6432-6438. |
Pyarelal, A., & Su, S. (2020). Higgs assisted razor search for Higgsinos at a 100 TeV pp collider. SCIENCE CHINA Physics, Mechanics & Astronomy, 63(10), 1-9. |
Klein, K. G., Martinović, M., Stansby, D., & Horbury, T. S. (2019). Linear stability in the inner heliosphere: Helios re-evaluated. The Astrophysical Journal, 887(2), 234. |
Yazdi, E. T., Limaye, A., Akoglu, A., Adegbija, T., & Buntzman, A. (2019, December). Bit-wise and Multi-GPU Implementations of the DNA Recombination Algorithm. In 2019 IEEE 26th International Conference on High Performance Computing, Data, and Analytics (HiPC) (pp. 131-140). IEEE. |
Sarid, G., Volk, K., Steckloff, J. K., Harris, W., Womack, M., & Woodney, L. M. (2019). 29P/Schwassmann–Wachmann 1, a centaur in the gateway to the Jupiter-family comets. The Astrophysical Journal Letters, 883(1), L25. |
Grant, A. D., Vail, P., Padi, M., Witkiewicz, A. K., & Knudsen, E. S. (2019). Interrogating mutant allele expression via customized reference genomes to define influential cancer mutations. Scientific reports, 9(1), 1-15. |
Volk, K., & Malhotra, R. (2019). Not a simple relationship between Neptune’s migration speed and Kuiper belt inclination excitation. The Astronomical Journal, 158(2), 64. |
Kling, F., Li, H., Pyarelal, A., Song, H., & Su, S. (2019). Exotic Higgs decays in Type-II 2HDMs at the LHC and future 100 TeV hadron colliders. Journal of High Energy Physics, 2019(6), 1-33. |
Esmaili, E., Akoglu, A., Hariri, S., & Moukabary, T. (2019). Implementation of scalable bidomain-based 3d cardiac simulations on a graphics processing unit cluster. The Journal of Supercomputing, 75(8), 5475-5506. |
Schissler, A. G., Piegorsch, W. W., & Lussier, Y. A. (2018). Testing for differentially expressed genetic pathways with single-subject N-of-1 data in the presence of inter-gene correlation. Statistical methods in medical research, 27(12), 3797-3813. |
Chen, N.-K., Chou, Y.-H., Sundman, M., Hickey, P., Kasoff, W. S., Bernstein, A., Lin, T., Rapcsak, S. Z., Sherman, S. J., Weingarten, C. P. (2018). Alteration of Diffusion-Tensor Magnetic Resonance Imaging Measures in Brain Regions Involved in Early Stages of Parkinson's Disease. Brain Connectivity, 8(6), 343-349. |
Alsayoud, A. Q., Manga, V. R., Muralidharan, K., Vita, J., Bringuier, S., Runge, K., & Deymier, P. (2018). Atomistic insights into the effect of polymerization on the thermophysical properties of 2-D C-60 molecular solids. Carbon, 133, 267-274. |
Gladstein, A. L., Quinto-Cortés, C. D., Pistorius, J. L., Christy, D., Gantner, L., & Joyce, B. L. (2018). SimPrily: A Python framework to simplify high-throughput genomic simulations. SoftwareX, 7, 335-340. |
Lucas, P., Coleman, G. J., Venkateswara Rao, M., Edwards, A. N., Devaadithya, C., Wei, S., ... & Deymier, P. A. (2017). Structure of ZnCl2 melt. Part II: Fragile-to-strong transition in a tetrahedral liquid. The Journal of Physical Chemistry B, 121(49), 11210-11218. |
Vasquez, M. M., Hu, C., Roe, D. J., Chen, Z., Halonen, M., & Guerra, S. (2016). Least absolute shrinkage and selection operator type methods for the identification of serum biomarkers of overweight and obesity: simulation and application. BMC medical research methodology, 16(1), 1-19. |
Hendler, N. P., Mulders, G. D., Pascucci, I., Greenwood, A., Kamp, I., Henning, T., ... & Evans II, N. J. (2017). Hints for Small Disks around Very Low Mass Stars and Brown Dwarfs∗. The Astrophysical Journal, 841(2), 116. |
Li, Q., Schissler, A. G., Gardeux, V., Achour, I., Kenost, C., Berghout, J., ... & Lussier, Y. A. (2017). N-of-1-pathways MixEnrich: advancing precision medicine via single-subject analysis in discovering dynamic changes of transcriptomes. BMC Medical Genomics, 10(1), 5-16. |
Lorenzo, A. T., Morzfeld, M., Holmgren, W. F., & Cronin, A. D. (2017). Optimal interpolation of satellite and ground data for irradiance nowcasting at city scales. Solar Energy, 144, 466-474. |
Li, Q., Schissler, A. G., Gardeux, V., Berghout, J., Achour, I., Kenost, C., ... & Lussier, Y. A. (2017). kMEn: Analyzing noisy and bidirectional transcriptional pathway responses in single subjects. Journal of biomedical informatics, 66, 32-41. |
Schlawin, E., Rieke, M., Leisenring, J., Walker, L. M., Fraine, J., Kelly, D., ... & Stansberry, J. (2016). Two NIRCam channels are better than one: how JWST can do more science with NIRCam’s short-wavelength dispersed Hartmann sensor. Publications of the Astronomical Society of the Pacific, 129(971), 015001. |
Danford, F., Welch, E., Cárdenas-Ródriguez, J., & Strout, M. M. (2016, September). Analyzing parallel programming models for magnetic resonance imaging. In International Workshop on Languages and Compilers for Parallel Computing (pp. 188-202). Springer, Cham. |
Schissler, A. G., Li, Q., Chen, J. L., Kenost, C., Achour, I., Billheimer, D. D., ... & Lussier, Y. A. (2016). Analysis of aggregated cell–cell statistical distances within pathways unveils therapeutic-resistance mechanisms in circulating tumor cells. Bioinformatics, 32(12), i80-i89. |